In my autopilots, I have used a remote control to "dodge" that is to make a deviation in course, around an obstruction, and then the boat will return to the selected course. You can also have the remote control the course-in increments of 1* or 10*. When using the "dodge" function, you are basically steering the boat with electrical steering. Many of the larger yachts don't have a wheel--especially at "stations" other than the master helm.--and even there may have steering with a lever or joy stick.
To my knowledge the Garmin auto pilot is the only one with "shadow" drive. It it very simple to "pause" the pilot steer, and then have the pilot resume.
Just because you have an autopilot is no excuse not to have eyes on the water and constantly scanning ahead, as well as watching the depth sounder and chart plotter. The auto pilot actually should allow for more time scanning the water.
I prefer to have two chart plotters, or one with a split screen displaying large scale and small scale charts. Look for the details in depths and obstructions, which may have been missed in route planning. Then there is the radar and AIS plots, which give you more dynamic information about vessels which may pose a threat of collision.